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cerea
documentation
tp_polu1-doc
Commits
c928c251
Commit
c928c251
authored
May 07, 2020
by
Youngseob KIM
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parent
cc35087a
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tp_polu1-doc.tex
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tp_polu1-doc.tex
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c928c251
...
...
@@ -139,8 +139,8 @@
If your login is successful, please follow the next step
\begin{Verbatim}
[fontsize=
\small
]
> ssh YourMachine
> mkdir /net/libre/
trami
/YourID
> cd /net/libre/
trami
/YourID
> mkdir /net/libre/
jomungand
/YourID
> cd /net/libre/
jomungand
/YourID
\end{Verbatim}
...
...
@@ -151,23 +151,17 @@
\begin{frame}
[fragile]
{
Download the configuration files and input data
}
\begin{block}
{}
\begin{Verbatim}
[fontsize=
\small
]
> cd <working
_
directory>/Polyphemus-1.11.1/processing/scram-soap
> scons
\end{Verbatim}
\begin{verbatim}
> tar -xjvf tp
_
polu1.tar.bz2
\end{verbatim}
You need to download and extract the archive
\code
{
tp
\_
polu1.tar.bz2
}
in your working directory.
\begin{Verbatim}
[fontsize=
\small
]
> cp /net/libre/trami/kimy/tp
_
polu1.tar.bz2 .
> tar -xjvf tp
_
polu1.tar.bz2
> cd tp
_
polu1
\end{Verbatim}
\end{block}
\begin{verbatim}
> tar -xjvf tp
_
polu1.tar.bz2
\end{verbatim}
\begin{block}
{}
Please check if you have the following sub-folders in
\code
{
tp
\_
polu1
}
:
...
...
@@ -179,46 +173,30 @@ Please check if you have the following sub-folders in \code{tp\_polu1}:
grow via three points=
{
one child at (0.5,-0.7) and
two children at (0.5,-0.7) and (0.5,-1.4)
}
,
edge from parent path=
{
(
\tikzparentnode
.south) |- (
\tikzchildnode
.west)
}
]
\node
{
sing-training
}
child
{
node
{
\code
{
Polyphemus-XXX
}
:
}}
child
{
node
{
\code
{
rawdata
}
:
}}
child
{
node [selected]
{
\code
{
polair3d
}
:
}
child
{
node
{
europe
}
}
child
{
node
{
france
}}
}
;
% child { node [selected] {tex}
% child { node {generic}}
% child { node [optional] {latex}}
% child { node {plain}}
% }
% child [missing] {}
% child [missing] {}
% child [missing] {}
% child { node {texdoc}};
\node
{
tp
\_
polu1
}
child
{
node
{
\code
{
Polyphemus-1.11.1
}
: Polyphemus source files
}}
child
{
node
{
\code
{
simulation
\_
2016
}}
child
{
node
{
\code
{
config
}
: configurations files
}}
}
;
\end{tikzpicture}
\end{block}
\end{frame}
%%%
\begin{frame}
[fragile]
{
Sub-folders
}
\begin{frame}
[fragile]
{
Additional files
}
\begin{block}
{
Link to input data and a folder for results data
}
\begin{Verbatim}
[fontsize=
\small
]
> ln -s /net/libre/trami/kimy/tp
_
polu1/simulation
_
2016/data .
> mkdir results
\end{Verbatim}
\begin{block}
{}
\begin{itemize}
\item
\code
{
europe
}
:
\begin{itemize}
\item
\code
{
preprocessing
}
: python scripts to convert raw data for SinG simulation.
\item
\code
{
processing
}
: configuration files for SinG simulation.
\item
\code
{
data
}
\item
\code
{
results
}
\end{itemize}
\item
\code
{
france
}
\end{itemize}
\end{block}
\end{frame}
...
...
@@ -231,8 +209,8 @@ Please check if you have the following sub-folders in \code{tp\_polu1}:
It is compiled by typing
\code
{
scons
}
.
\begin{Verbatim}
[fontsize=
\small
]
> cd
<working
_
directory>
/Polyphemus-1.11.1/processing/scram-soap
> scons
> cd
..
/Polyphemus-1.11.1/processing/scram-soap
> scons
-j4 mpi=yes
\end{Verbatim}
...
...
@@ -438,9 +416,9 @@ For dust, the total mass of \code{PMD} is \code{PMD\_0 + PMD\_1 + PMD\_2 + PMD\_
\end{block}
\begin{block}
{
Particulate Matter: by size
}
\begin{block}
{
Regulated
Particulate Matter: by size
}
\begin{itemize}
\item
\small
Coarse particles:
PM
$_{
10
}$
(diameter less than 10
$
\micro
$
m)
\item
\small
PM
$_{
10
}$
(diameter less than 10
$
\micro
$
m)
\item
\small
Fine particles: PM
$_{
2
.
5
}$
(diameter less than 2.5
$
\micro
$
m)
\end{itemize}
\end{block}
...
...
@@ -450,8 +428,6 @@ For dust, the total mass of \code{PMD} is \code{PMD\_0 + PMD\_1 + PMD\_2 + PMD\_
%%%%%
\begin{frame}
[fragile]
{
Pollutant concentrations
}
\centering
\begin{block}
{
Concentrations of pollutants (in
$
\micro
$
g m
$^{
-
3
}$
)
}
\begin{itemize}
\item
\small
Ozone:
...
...
@@ -461,7 +437,7 @@ For dust, the total mass of \code{PMD} is \code{PMD\_0 + PMD\_1 + PMD\_2 + PMD\_
\end{itemize}
\end{block}
\begin{block}
{
Chemical composition of PM (in
$
\micro
$
g m
$^{
-
3
}$
)
}
\begin{block}
{
Chemical composition of PM
$_{
10
}$
(in
$
\micro
$
g m
$^{
-
3
}$
)
}
\begin{itemize}
\item
\small
Dust:
\item
\small
Black carbon:
...
...
@@ -489,11 +465,12 @@ European emission standards for exhaust emissions of new vehicles changed from E
\begin{Verbatim}
[fontsize=
\scriptsize
]
> cd <working
_
directory>/Polyphemus-1.11.1/utils
> scons mult
_
nb
_
float
> cd ../../simulation
_
2016/data/emissions/surface-emissions
> cd ../../
> mdkir data
_
modif
> cd data
_
modif
> ln -s ../../Polyphemus-1.11.1/utils/mult
_
nb
_
float .
> mult
_
nb
_
float NO.bin 0.45 NO
_
modif.bin
> mult
_
nb
_
float NO2.bin 0.45 NO2
_
modif.bin
> mult
_
nb
_
float ../data/emissions/surface-emissions/NO.bin 0.45 NO
_
modif.bin
> mult
_
nb
_
float ../data/emissions/surface-emissions/NO2.bin 0.45 NO2
_
modif.bin
\end{Verbatim}
\end{block}
...
...
@@ -513,8 +490,8 @@ Fields: ALD2 CH4 ETHA IOLE MEOH SO2 XYL ALDX CO ETOH HC8 ISOP NH3 OLE TERP ETH
FORM HONO PAR TOL API LIM SULF POAhP POAlP POAmP
Filename: <Directory
_
data>/emissions/surface-emissions/
&
f.bin
NO:
<Directory
_
data>/emissions/surface-emissions
/NO
_
modif.bin
NO2:
<Directory
_
data>/emissions/surface-emissions
/NO2
_
modif.bin
NO:
../data
_
modif
/NO
_
modif.bin
NO2:
../data
_
modif
/NO2
_
modif.bin
\end{Verbatim}
\end{block}
...
...
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